Journal publications
V. Cheplygina, A. Perez-Rovira, W. Kuo, H. Tiddens, M. de Bruijne. “Crowdsourcing airway annotations in chest computed tomography images”. 22:16(4):e0249580. PLOS One. 2021. [pdf] [url].
W. Kuo, A. Perez-Rovira, H. Tiddens, M. de Bruijne, on behalf of the Normal Chest CT study group. “Airway tapering: an objective image biomarker for bronchiectasis“. doi:10.1007/s00330-018-5863-7. European Radiology. 2019. [pdf] [url].
A. Nguyen, A. Perez-Rovira, P. Wielopolski, J. Hernandez Tamames, L. Duijts, M. de Bruijne, A. Aliverti, F. Pennati, T. Ivanovska, H. Tiddens, P. Ciet. “Technical challenges of quantitative chest MRI data analysis in a large cohort pediatric study“. doi:10.1007/s00330-018-5863-7. European Radiology. 2019. [pdf] [url]
This paper was been presented to the European Conference of Radiology (ECR 2018) and awarded as the best scientific paper presentation in the section Pediatrics
W. Kuo, M. de Bruijne, J. Petersen, K. Nasserinejad, H. Ozturk, Y. Chen, A. Perez-Rovira, H. Tiddens. “Diagnosis of bronchiectasis and airway wall thickening in children with cystic fibrosis: Objective airway-artery quantification“. Vol. 27 (11), Pp. 4680-4689. doi:10.1007/s00330-017-4819-7. European Radiology. 2017. [pdf] [url]
W. Kuo, E-R. Andrinopoulou, A. Perez-Rovira, H. Ozturk, M. de Bruijne, H.A.W.M. Tiddens. “Objective airway artery dimensions compared to CT scoring methods assessing structural cystic fibrosis lung disease“. Vol. 16(1), Pp. 116-123. doi:10.1016/j.jcf.2016.05.015. Journal of Cystic Fibrosis. 2017. [url]
A. Perez-Rovira, W. Kuo, J. Petersen, H. Tiddens, M. de Bruijne. “Automatic airway-artery pairing on lung CT to quantify airway wall thickness and bronchiectasis“. Vol. 43, Pp. 5736-5744 (10). doi:10.1118/1.4963214. Medical physics. 2016. [url] [pdf]
L.A. Tepper, D. Caudri, A. Perez-Rovira, H.A.W.M. Tiddens, M. de Bruijne. “The development of bronchiectasis on chest computed tomography in children with cystic fibrosis: Can pre-stages be identified?“. Vol. 26 (12), Pp. 4563–4569. doi:10.1007/s00330-016-4329-z. European Radiology. 2016. [url]
K. Mogalle, A. Perez-Rovira, P. Ciet, S.C.A. Wens, P. A van Doorn, H.A.W.M. Tiddens, A.T. van der Ploeg, M. de Bruijne. “Automatic Quantification of Diaphragm Mechanics in Pompe Disease using Dynamic 3D MRI“. 11 (7), e0158912. doi:10.1371/journal.pone.0158912. PLOS ONE, 2016. [url] [pdf]
W. Kuo, M.P.C. Kemner-van de Corput, A. Perez-Rovira, M. de Bruijne, I. Fajac, H.A.W.M. Tiddens, M. van Straten. “Multicenter chest CT standardisation in children and adolescents with CF: The way forward“. Vol 48(4). Pp. 1706-17. doi:. European Respiratory Journal. 2016. [url]
S.C. Wens, P. Ciet, A. Perez-Rovira, K. Logie, E. Salamon, P. Wielopolski, M. de Bruijne, M.E. Kruijshaar, H.W. Tiddens, P.A. van Doorn, A.T. van der Ploeg. “Lung MRI and impairment of diaphragmatic function in Pompe disease“. 15:54. doi:10.1186/s12890-015-0058-3. BMC Pulmonary Medicine, 2015. [url] [pdf]
A. Perez-Rovira, R. Cabido, E. Trucco, S. McKenna and J.P. Hubschman, “RERBEE: Robust Efficient Registration via Bifurcations and Elongated Elements applied to retinal fluorescein angiogram sequences“. Vol 31(1), Pp. 140-150. doi: 10.1109/TMI.2011.2167517. IEEE Transactions on Medical Imaging. 2012. [url] [pdf]
A. Perez-Rovira, E. Trucco “Contextual optic disc location in retinal fundus images“. Volume 57, Issue 2, Pp. 136-144. doi: 10.1080/09500340903434526. Journal of Modern Optics. 2010. [url] [pdf]
Book chapters
T. J. MacGillivray, A. Perez-Rovira, E. Trucco, K. S. Chin, A .Giachetti, C. Lupescu, D. Tegolo, P.J. Wilson, A. Doney, A. Laude and B. Dhillon, “VAMPIRE: Vessel Assessment and Measurement Platform for Images of the Retina“. Chapter 2 on “MULTI-MODALITY STATE-OF-THE-ART: HUMAN EYE IMAGING AND MODELING” ISBN13: 9781439869932. E. Y. K. Ng; Jen Hong Tan; U. Rajendra Acharya; Jasjit S. Suri (Eds) CRC Press – 408 Pages. 2012. [url]
Conference papers (with proceedings)
T. Ivanovska, P. Ciet, A. Perez-Rovira, A. Nguyen, H. Tiddens, L. Duijts, M. de Bruijne, F. Woergoetter. “Fully automated lung volume assessment from MRI in a population-based child cohort study“. Pp. (6)53-58. doi: 10.5220/0006075300530058. Proceedings of the 12th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications – VISAPP, Porto (Portugal). 2017.
V. Cheplygina, A. Perez-Rovira, W. Kuo, H.A.W.M. Tiddens and M. de Bruijne. “Early Experiences with Crowdsourcing Airway Annotations in Chest CT“. Pp. 209-218, doi: 10.1007/978-3-319-46976-8_22. International Workshop on Large-Scale Annotation of Biomedical Data and Expert Label Synthesis, Springer International Publishing, Athens (Greece), 2016. [url] [pdf]
A. Perez-Rovira, E. Trucco, J. Weir-Mccall, G. Houston, “GroBa: Growing balloons for calibre measurement on stenotic lumens“. doi: 10.1109/CBMS.2012.6266305. 25th IEEE International Symposium on Computer-Based Medical Systems (CBMS). Rome (Italy), 2012. [url] [pdf]
A. Perez-Rovira, K. Zutis, J.P. Hubschman and E. Trucco, “Improving vessel segmentation in ultra-wide field-of-view retinal fluorescein angiograms“. Pp 2614-2617. doi: 10.1109/IEMBS.2011.6090721. 33rd International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). Boston (USA). 2011. [url] [pdf] [data]
A. Perez-Rovira, T. MacGillivray, E. Trucco, K.S. Chin, K. Zutis, C. Lupascu, D. Tegolo, A. Giachetti, P.J. Wilson, A. Doney, and B. Dhillon “VAMPIRE: Vessel Assessment and Measurement Platform for Images of the REtina“. Pp 3391-3394. doi: 10.1109/IEMBS.2011.6090918. 33rd International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). Boston (USA). 2011. [url] [pdf]
A. Perez-Rovira, E. Trucco and P. Wilson, J. Li, “Deformable registration of retinal fluorescein angiogram sequences using vasculature structures“. Pp.4383-4386. doi: 10.1109/IEMBS.2010.5627094. 32nd International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). Buenos Aires (Argentina). 2010. [url] [pdf]
A. Perez-Rovira, E. Trucco “Robust optic disc location via combination of weak detectors“. Pp. 3542-3545. doi: 10.1109/IEMBS.2008.4649970. 30th International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).. Vancouver (Canada). 2008. [url] [pdf]
B. Martínez, A. Pérez, L. Ferraz, X. Binefa. “Structure restriction for tracking through multiple views and occlusions“. Pp 121-128. doi: 10.1007/978-3-540-72847-4_17. 3rd Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA). Girona (Spain). 2007. [url]
A. Perez-Rovira, B. Martinez, X. Binefa. “Ground plane estimation based on virtual camera rotation“. Pp. 181-188. 10th Congrés Internacional de l’Associació Catalana d’Intel·ligència Artificial (CCIA). Sant Julià de Lòria (Andorra). 2007. [url]
Conference abstracts
P. Ciet, A. Bos, P. Wielopolski, JA. Hernández-Tamames, M. de Bruijne, H.A.W.M. Tiddens, A. Perez-Rovira. “Three-dimensional Fourier Decomposition Ventilation Magnetic Resonance Lung Imaging“. European Congress of Radiology (ECR), Vienna (Austria). 2017.
W. Kuo, A. Perez-Rovira, H.A.W.M. Tiddens, M. de Bruijne. “A novel image biomarker for bronchiectasis: airway tapering“. North American Cystic Fibrosis Conference, Orlando, Florida (US). 2016
W. Kuo, A. Perez-Rovira, E. R. Andrinopoulou, H. Ozturk, H.A.W.M. Tiddens. “WS08.3. CF-CT and PRAGMA-CF scoring techniques compared using quantification with objective airway and artery dimensions of children with cystic fibrosis“. 39th European Cystic Fibrosis Conference, Basel (Switzerland). 2016.
W. Kuo, T. Soffers, T. Rosenow, A. Perez-Rovira, E. R. Andrinopoulou, S.M. Stick, H.A.W.M. Tiddens. “WS08.2 Objective diagnosis of early structural lung disease on chest CT: assessment of airway and artery dimensions in young children with cystic fibrosis“. 39th European Cystic Fibrosis Conference, Basel (Switzerland). 2016.
A. Perez-Rovira, W. Kuo, J. Petersen, H.A.W.M. Tiddens, M. de Bruijne “Automated quantification of bronchiectasis, airway wall thickening and lumen tapering in chest CT“. European Congress of Radiology (ECR), Vienna (Austria). 2015. [url]
W. Kuo, M. de Bruijne, K. Nasserinejad, H. Ozturk, Y. Chen, A. Perez-Rovira, H.A.W.M. Tiddens “Assessment of bronchiectasis in children with cystic fibrosis by comparing airway and artery dimensions to normal controls on inspiratory and expiratory spirometer guided chest computed tomography“. European Congress of Radiology (ECR), 2015.
W. Kuo, M. de Buijne, H. Ozturk, B. Li, A. Perez-Rovira, H.A.W.M. Tiddens. “Sensitive and objective method to diagnose bronchiectasis on inspiratory and expiratory chest computed tomography in children with CF“. Pp. (49) 366-367. North American Cystic Fibrosis Conference, 2014.
S.C. Wens, P. Ciet, A. Perez-Rovira, K. Logie, E. Salamon, P. Wielopolski, M. de Bruijne, M.E. Kruijshaar, H.W. Tiddens, N.A.M. van der Beek, P.A. van Doorn, A.T. van der Ploeg, “Cine-MRI as a new tool to evaluate diaphragmatic dysfunction in Pompe disease“. Neuromuscular Disorders, volume 24(9-10), page 839. doi: 10.1016/j.nmd.2014.06.159. 19th International Congress of The World Muscle Society, 2014. [url]
S.C. Wens, P. Ciet, A. Perez-Rovira, K. Logie, E. Salamon, P. Wielopolski, M. de Bruijne, M.E. Kruijshaar, H.W. Tiddens, P.A. van Doorn, A.T. van der Ploeg, “Severely impaired diaphragmatic function in Pompe disease visualized by cine-MRI“. 13th International Congress on Neuromuscular Diseases (ICNMD), 2014.
L.A. Tepper, M. de Bruijne, D.Caudri, A. Perez-Rovira, H.A.W.M. Tiddens, “The history of bronchiectasis on CT in cystic fibrosis“. 27th Annual North American Cystic Fibrosis Conference (NACFC), 2013.
P. Ciet, S. Wens, A. Perez-Rovira, K. Logie, P. Wielopolski, M. de Bruijne, A. van der Ploeg, P. van Doorn, and H. Tiddens. “Respiratory muscle movement in pompe disease using cine magnetic resonance imaging“. 99th Annual Meeting of the Radiological Society of North America (RSNA), 2013. [url]
D.N.B. Gadelha, E. Trucco, A. Perez-Rovira, N.N.C. Batista, M.C.S.C. Melo and C.T. Brandt. “A spectral model of the tortuosity of the retinal vascular network“. Association for Research in Vision and Ophthalmology (ARVO). 2012.
V. Franco-Cardenas, C. J. Gee, D. Appap, K. Nishida, A. Ramirez, A. Perez-Rovira, K. Zutis, S. D. Schwartz, E. Trucco and J.P. Hubschman, “Assessment of retinal non-perfusion in vascular retinal diseases using single versus summarized ultra wide-field fluorescein angiography images“. Association for Research in Vision and Ophthalmology (ARVO). 2012.
S. Tiew, A. Perez-Rovira, M. Trucco, S. Mahmood, P. Bishop and T. Aslam, “Experience in using the VAMPIRE retinal analysis tool to assess tortuosity in patients undergoing Bevacizumab (Avastin®) treatment for wet age-related macular degeneration (AMD)“. Association for Research in Vision and Ophthalmology (ARVO). 2011. [url]